ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lybl42 - ECOD Domain | ECOD

ECOD/Domains/e5lybl42

e5lybl42

UID: 001922370

PDB

Range: l4:270-362
PDB: 5LYB chain l4(all domains)
UniProt: P10664 (all domains)
Gene: RPL4A

Molecule: 60S ribosomal protein L4-A

3D Structure

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Related Domains

Browse other domains in Ribos_L4_asso_C →

Classification

AArchitectureextended segments(a.20)

XX-groupC-terminal helical region in 60S ribosomal protein L4 (L4p)(3319)

HH-groupC-terminal helical region in 60S ribosomal protein L4 (L4p)(3319.1)

TT-groupC-terminal helical region in 60S ribosomal protein L4 (L4p)(3319.1.1)

FFamilyRibos_L4_asso_C(3319.1.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14374Ribos_L4_asso_C

60S ribosomal protein L4 C-terminal domain

External Links

ECOD PDB View: 5LYB RCSB PDB: 5LYB PDBe: 5LYB UniProt: P10664

Downloads

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