ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5lybm51 - ECOD Domain | ECOD

ECOD/Domains/e5lybm51

e5lybm51

UID: 001922391

PDB

Range: m5:2-204
PDB: 5LYB chain m5(all domains)
UniProt: P05748 (all domains)
Gene: RPL15A

Molecule: 60S ribosomal protein L15-A

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L15e →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal proteins S24e, L23 and L15e(304.109)

TT-groupRibosomal proteins S24e, L23 and L15e(304.109.1)

FFamilyRibosomal_L15e(304.109.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00827Ribosomal_L15e

Ribosomal L15

ClanCL0652S24e_L23_L15e

External Links

ECOD PDB View: 5LYB RCSB PDB: 5LYB PDBe: 5LYB UniProt: P05748

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure