ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fm0B1 - ECOD Domain | ECOD

ECOD/Domains/e5fm0B1

e5fm0B1

UID: 001923752

PDB

Range: B:5-256
PDB: 5FM0 chain B(all domains)
UniProt: P53559 (all domains)
Gene: bioW

Molecule: 6-CARBOXYHEXANOATE--COA LIGASE

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-group6-carboxyhexanoate-CoA ligase(1119)

HH-group6-carboxyhexanoate-CoA ligase(1119.1)

TT-group6-carboxyhexanoate-CoA ligase(1119.1.1)

FFamilyBioW(1119.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyrophosphoric acidPPV
drugDrugBank DB04160
PLATINUM (II) IONPT
metal
Pimeloyl-amp

Pfam Families

6-carboxyhexanoate--CoA ligase

External Links

ECOD PDB View: 5FM0 RCSB PDB: 5FM0 PDBe: 5FM0 UniProt: P53559

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.