ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fo0B2 - ECOD Domain | ECOD

ECOD/Domains/e5fo0B2

e5fo0B2

UID: 001923918

PDB

Range: B:1-185
PDB: 5FO0 chain B(all domains)
UniProt: Q59263 (all domains)
Gene: ribF

Molecule: RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF

3D Structure

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Related Domains

Browse other domains in FAD_syn →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyFAD_syn(2005.1.1.28)

Ligands

in contact, ≤ 4 Å

Pyrophosphoric acidPPV
drugDrugBank DB04160

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF06574FAD_syn

FAD synthetase

ClanCL0039HUP

External Links

ECOD PDB View: 5FO0 RCSB PDB: 5FO0 PDBe: 5FO0 UniProt: Q59263

Downloads

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Drug annotations from DrugDomain.