ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5g10B1 - ECOD Domain | ECOD

ECOD/Domains/e5g10B1

e5g10B1

UID: 001923957

PDB

Range: B:2-377
PDB: 5G10 chain B(all domains)
UniProt: Q9HXM1 (all domains)
Gene: PA3774

Molecule: HDAH

3D Structure

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Related Domains

Browse other domains in Hist_deacetyl →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupArginase/deacetylase(2006.1.5)

FFamilyHist_deacetyl(2006.1.5.2)

Ligands

in contact, ≤ 4 Å

9,9,9-tris(fluoranyl)-8,8-bis(oxidanyl)-~{N}-phenyl-nonanamide6DK
Potassium ionK
metal
Zinc ionZN

Pfam Families

PF00850Hist_deacetyl

Histone deacetylase domain

ClanCL0302Arginase

External Links

ECOD PDB View: 5G10 RCSB PDB: 5G10 PDBe: 5G10 UniProt: Q9HXM1

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.