ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tamE1 - ECOD Domain | ECOD

ECOD/Domains/e5tamE1

e5tamE1

UID: 001928760

PDB

Range: E:4545-4587,E:4626-5037
PDB: 5TAM chain E(all domains)
UniProt: P11716 (all domains)
Gene: RYR1

Molecule: Ryanodine receptor 1

3D Structure

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Related Domains

Browse other domains in Ion_trans,RR_TM4-6 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans,RR_TM4-6(5054.1.1.3)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
CaffeineCFF
drugDrugBank DB00201
Calcium ion

Pfam Families

PF00520Ion_trans

Ion transport protein

ClanCL0030Ion_channel

PF06459RR_TM4-6

Ryanodine Receptor TM 4-6

External Links

ECOD PDB View: 5TAM RCSB PDB: 5TAM PDBe: 5TAM UniProt: P11716

Downloads

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metal

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.