ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gp1C1 - ECOD Domain | ECOD

ECOD/Domains/e5gp1C1

e5gp1C1

UID: 001930859

PDB

Range: C:4-264
PDB: 5GP1 chain C(all domains)
UniProt: A0A024B7W1 (all domains)

Molecule: RNA-directed RNA polymerase NS5

3D Structure

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Related Domains

Browse other domains in FtsJ →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyFtsJ(2003.1.5.15)

Ligands

in contact, ≤ 4 Å

7-methyl-GpppAGTA
drugDrugBank DB01649
S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

Pfam Families

FtsJ-like methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5GP1 RCSB PDB: 5GP1 PDBe: 5GP1 UniProt: A0A024B7W1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

NICKEL (II) ION

metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.