ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m72A1 - ECOD Domain | ECOD

ECOD/Domains/e5m72A1

e5m72A1

UID: 001931243

RepresentativePDB

Range: A:10-159
PDB: 5M72 chain A(all domains)
UniProt: O76094 (all domains)
Gene: SRP72

Molecule: Signal recognition particle subunit SRP72

3D Structure

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Related Domains

Browse other domains in SRP_TPR_like →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySRP_TPR_like(109.4.1.238)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

PF17004SRP_TPR_like

Putative TPR-like repeat

ClanCL0020TPR

External Links

ECOD PDB View: 5M72 RCSB PDB: 5M72 PDBe: 5M72 UniProt: O76094

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.