ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tv8B1 - ECOD Domain | ECOD

ECOD/Domains/e5tv8B1

e5tv8B1

UID: 001931375

PDB

Range: B:2-240
PDB: 5TV8 chain B(all domains)
UniProt: O67575 (all domains)
Gene: bioW

Molecule: 6-carboxyhexanoate--CoA ligase

3D Structure

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Related Domains

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Classification

AArchitecturea+b complex topology(a.14)

XX-group6-carboxyhexanoate-CoA ligase(1119)

HH-group6-carboxyhexanoate-CoA ligase(1119.1)

TT-group6-carboxyhexanoate-CoA ligase(1119.1.1)

FFamilyBioW(1119.1.1.1)

Ligands

in contact, ≤ 4 Å

alpha,beta-Methyleneadenosine 5'-triphosphateAPC
drugDrugBank DB02596
Pimelic AcidPML
drugDrugBank DB01856

Pfam Families

6-carboxyhexanoate--CoA ligase

External Links

ECOD PDB View: 5TV8 RCSB PDB: 5TV8 PDBe: 5TV8 UniProt: O67575

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.