ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k3wA1 - ECOD Domain | ECOD

ECOD/Domains/e5k3wA1

e5k3wA1

UID: 001933577

PDB

Range: A:2-15,A:25-142
PDB: 5K3W chain A(all domains)
UniProt: A0A1S4NYF0 (all domains)

Molecule: CpuTA1

3D Structure

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Related Domains

Browse other domains in Aminotran_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020)

HH-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020.1)

TT-groupa+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4020.1.1)

FFamilyAminotran_4(4020.1.1.1)

Ligands

in contact, ≤ 4 Å

GabaculineGAB
drugDrugBank DB02054
Pyridoxal phosphatePLP
drugDrugBank DB00114

Shown in the structure viewer.

Pfam Families

PF01063Aminotran_4

Amino-transferase class IV

External Links

ECOD PDB View: 5K3W RCSB PDB: 5K3W PDBe: 5K3W UniProt: A0A1S4NYF0

Downloads

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Drug annotations from DrugDomain.