ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k3wB2 - ECOD Domain | ECOD

ECOD/Domains/e5k3wB2

e5k3wB2

UID: 001933580

PDB

Range: B:141-304
PDB: 5K3W chain B(all domains)
UniProt: A0A1S4NYF0 (all domains)

Molecule: CpuTA1

3D Structure

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Related Domains

Browse other domains in Aminotran_4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045)

HH-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045.1)

TT-groupbarrel domain in D-aminoacid aminotransferase-like PLP-dependent enzymes(4045.1.1)

FFamilyAminotran_4(4045.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01063Aminotran_4

Amino-transferase class IV

External Links

ECOD PDB View: 5K3W RCSB PDB: 5K3W PDBe: 5K3W UniProt: A0A1S4NYF0

Downloads

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