ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hl7A1 - ECOD Domain | ECOD

ECOD/Domains/e5hl7A1

e5hl7A1

UID: 001934836

PDB

Range: A:3-125
PDB: 5HL7 chain A(all domains)
UniProt: P60430 (all domains)
Gene: rplB

Molecule: 50S ribosomal protein L2

3D Structure

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Related Domains

Browse other domains in Ribosomal_L2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRibosomal_L2(2.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
MANGANESE (II) IONMN
metal

+ 1 additive (Ethanol)

Ethanol

Pfam Families

PF00181Ribosomal_L2_N

Ribosomal Proteins L2, RNA binding N-terminal domain

ClanCL0021OB

External Links

ECOD PDB View: 5HL7 RCSB PDB: 5HL7 PDBe: 5HL7 UniProt: P60430

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB00898within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.