ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5idnA1 - ECOD Domain | ECOD

ECOD/Domains/e5idnA1

e5idnA1

UID: 001934898

PDB

Range: A:1-363
PDB: 5IDN chain A(all domains)
UniProt: P49336 (all domains)
Gene: CDK8

Molecule: Cyclin-dependent kinase 8

3D Structure

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Related Domains

Browse other domains in Pkinase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase(206.1.1.1)

Ligands

in contact, ≤ 4 Å

[(2S)-2-(4-chlorophenyl)pyrrolidin-1-yl](3-methyl-1H-pyrazolo[3,4-b]pyridin-5-yl)methanone6A7

+ 2 additives (Formic acid, 1,2-ETHANEDIOL)

Formic acidFMT
DrugBank DB01942
1,2-ETHANEDIOL

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

External Links

ECOD PDB View: 5IDN RCSB PDB: 5IDN PDBe: 5IDN UniProt: P49336

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.