ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kd6B1 - ECOD Domain | ECOD

ECOD/Domains/e5kd6B1

e5kd6B1

UID: 001935066

PDB

Range: B:9-421
PDB: 5KD6 chain B(all domains)
UniProt: A0A1B0UHJ4 (all domains)
Gene: PT

Molecule: aromatic prenyltransferase

3D Structure

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Related Domains

Browse other domains in Trp_DMAT →

Classification

AArchitecturea+b duplicates or obligate multimers(a.15)

XX-groupPrenyltransferase-like(4194)

HH-groupPrenyltransferase-like(4194.1)

TT-groupPrenyltransferase-like(4194.1.1)

FFamilyTrp_DMAT(4194.1.1.2)

Ligands

in contact, ≤ 4 Å

Dimethylallyl S-ThiolodiphosphateDST
drugDrugBank DB02270within 5 Å only
methyl (2S)-4-hydroxy-3-(4-hydroxyphenyl)-2-[(4-hydroxyphenyl)methyl]-5-oxo-2,5-dihydrofuran-2-carboxylateLBU

Shown in the structure viewer.

Pfam Families

PF11991Trp_DMAT

Tryptophan dimethylallyltransferase

External Links

ECOD PDB View: 5KD6 RCSB PDB: 5KD6 PDBe: 5KD6 UniProt: A0A1B0UHJ4

Downloads

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Drug annotations from DrugDomain.