ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m5yB3 - ECOD Domain | ECOD

ECOD/Domains/e5m5yB3

e5m5yB3

UID: 001935312

PDB

Range: B:799-911
PDB: 5M5Y chain B(all domains)
UniProt: P22138 (all domains)
Gene: RPA135

Molecule: DNA-directed RNA polymerase I subunit RPA135

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_6 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325)

HH-groupalpha/beta-Hammerhead/Barrel-sandwich hybrid(325.1)

TT-groupSingle hybrid motif(325.1.7)

FFamilyRNA_pol_Rpb2_6(325.1.7.2)

Pfam Families

PF00562RNA_pol_Rpb2_6

RNA polymerase Rpb2, domain 6

ClanCL0410LEF-8-like

External Links

ECOD PDB View: 5M5Y RCSB PDB: 5M5Y PDBe: 5M5Y UniProt: P22138

Downloads

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