ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fbgB1 - ECOD Domain | ECOD

ECOD/Domains/e5fbgB1

e5fbgB1

UID: 001935889

PDB

Range: B:21-285
PDB: 5FBG chain B(all domains)
UniProt: P24021 (all domains)
Gene: nucS

Molecule: Nuclease S1

3D Structure

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Related Domains

Browse other domains in S1-P1_nuclease →

Classification

AArchitecturealpha bundles(a.7)

XX-groupPhospholipase C/P1 nuclease(177)

HH-groupPhospholipase C/P1 nuclease(177.1)

TT-groupPhospholipase C/P1 nuclease(177.1.1)

FFamilyS1-P1_nuclease(177.1.1.2)

Ligands

in contact, ≤ 4 Å

DoxecitineDCZ
drugDrugBank DB02594
N-AcetylglucosamineNAG
drugDrugBank DB00141
2'-DEOXY-GUANOSINE

Pfam Families

PF02265S1-P1_nuclease

S1/P1 Nuclease

ClanCL0368PhosC-NucP1

External Links

ECOD PDB View: 5FBG RCSB PDB: 5FBG PDBe: 5FBG UniProt: P24021

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.