ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jjvB1 - ECOD Domain | ECOD

ECOD/Domains/e5jjvB1

e5jjvB1

UID: 001936031

PDB

Range: B:304-361
PDB: 5JJV chain B(all domains)
UniProt: O25386 (all domains)
Gene: xerH

Molecule: Tyrosine recombinase XerH

3D Structure

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Related Domains

Browse other domains in Phage_integrase →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupDNA breaking-rejoining enzymes(101.1.8)

FFamilyPhage_integrase(101.1.8.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00589Phage_integrase

Phage integrase family

ClanCL0382DNA-mend

External Links

ECOD PDB View: 5JJV RCSB PDB: 5JJV PDBe: 5JJV UniProt: O25386

Downloads

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