ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mgnA2 - ECOD Domain | ECOD

ECOD/Domains/e5mgnA2

e5mgnA2

UID: 001936477

PDB

Range: A:13-134,A:186-298
PDB: 5MGN chain A(all domains)
UniProt: Q8N6T7 (all domains)
Gene: SIRT6

Molecule: NAD-dependent protein deacetylase sirtuin-6

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

Adenosine-5-DiphosphoriboseAR6
drugDrugBank DB02059
(4~{R})-4-pyridin-3-yl-5-[3-(trifluoromethyl)phenyl]sulfonyl-4~{H}-pyrrolo[1,2-a]quinoxaline7N2

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5MGN RCSB PDB: 5MGN PDBe: 5MGN UniProt: Q8N6T7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.