ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3pnlA2 - ECOD Domain | ECOD

ECOD/Domains/e3pnlA2

e3pnlA2

UID: 001937366

PDB

Range: A:184-356
PDB: 3PNL chain A(all domains)
UniProt: P76015 (all domains)
Gene: dhaK

Molecule: PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK

3D Structure

Loading viewer...

Related Domains

Browse other domains in Dak1 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupDAK1/DegV C-terminal domain(301.13)

TT-groupDAK1/DegV C-terminal domain(301.13.1)

FFamilyDak1(301.13.1.2)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833within 5 Å only
Magnesium ionMG
metalwithin 5 Å only

Pfam Families

Dak1 domain

ClanCL0245EDD

External Links

ECOD PDB View: 3PNL RCSB PDB: 3PNL PDBe: 3PNL UniProt: P76015

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.