ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vpvA1 - ECOD Domain | ECOD

ECOD/Domains/e1vpvA1

e1vpvA1

UID: 001937541

PDB

Range: A:1-156
PDB: 1VPV chain A(all domains)
UniProt: Q9X1H9 (all domains)
Gene: TM_1468

Molecule: UPF0230 protein TM1468

3D Structure

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Related Domains

Browse other domains in DegV →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupEDD domain(2010)

HH-groupEDD domain(2010.1)

TT-groupEDD domain(2010.1.1)

FFamilyDegV(2010.1.1.1)

Ligands

in contact, ≤ 4 Å

Palmitic AcidPLM
drugDrugBank DB03796

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

Uncharacterised protein, DegV family COG1307

ClanCL0245EDD

External Links

ECOD PDB View: 1VPV RCSB PDB: 1VPV PDBe: 1VPV UniProt: Q9X1H9

Downloads

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Drug annotations from DrugDomain.