ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vpvB1 - ECOD Domain | ECOD

ECOD/Domains/e1vpvB1

e1vpvB1

UID: 001937543

PDB

Range: B:157-287
PDB: 1VPV chain B(all domains)
UniProt: Q9X1H9 (all domains)
Gene: TM_1468

Molecule: UPF0230 protein TM1468

3D Structure

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Related Domains

Browse other domains in DegV →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupDAK1/DegV C-terminal domain(301.13)

TT-groupDAK1/DegV C-terminal domain(301.13.1)

FFamilyDegV(301.13.1.1)

Ligands

in contact, ≤ 4 Å

Palmitic AcidPLM
drugDrugBank DB03796

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer.

Pfam Families

Uncharacterised protein, DegV family COG1307

ClanCL0245EDD

External Links

ECOD PDB View: 1VPV RCSB PDB: 1VPV PDBe: 1VPV UniProt: Q9X1H9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.