ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5t4yB1 - ECOD Domain | ECOD

ECOD/Domains/e5t4yB1

e5t4yB1

UID: 001937918

PDB

Range: B:1-552
PDB: 5T4Y chain B(all domains)
UniProt: Q8A6W4 (all domains)
Gene: BT_1762

Molecule: SusD homolog

3D Structure

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Related Domains

Browse other domains in SusD family / Starch-binding associating with outer membrane →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySusD family / Starch-binding associating with outer membrane(109.4.1.105)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07980SusD_RagB

SusD family

ClanCL0020TPR

PF14322SusD-like_3

Starch-binding associating with outer membrane

ClanCL0020TPR

External Links

ECOD PDB View: 5T4Y RCSB PDB: 5T4Y PDBe: 5T4Y UniProt: Q8A6W4

Downloads

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