ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iy5T1 - ECOD Domain | ECOD

ECOD/Domains/e5iy5T1

e5iy5T1

UID: 001942625

PDB

Range: T:1-84
PDB: 5IY5 chain T(all domains)
UniProt: P07471 (all domains)
Gene: COX6A2

Molecule: Cytochrome c oxidase subunit 6A2, mitochondrial

3D Structure

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Related Domains

Browse other domains in COX6A →

Classification

AArchitectureextended segments(a.20)

XX-groupMitochondrial cytochrome c oxidase subunit VIa(5004)

HH-groupMitochondrial cytochrome c oxidase subunit VIa(5004.1)

TT-groupMitochondrial cytochrome c oxidase subunit VIa(5004.1.1)

FFamilyCOX6A(5004.1.1.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
Cholic AcidCHD
drugDrugBank DB02659
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE

Pfam Families

Cytochrome c oxidase subunit VIa

External Links

ECOD PDB View: 5IY5 RCSB PDB: 5IY5 PDBe: 5IY5 UniProt: P07471

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATEPGV

Unknown ligandUNL

Shown in the structure viewer. Drug annotations from DrugDomain.