ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m17A1 - ECOD Domain | ECOD

ECOD/Domains/e5m17A1

e5m17A1

UID: 001942791

PDB

Range: A:31-379
PDB: 5M17 chain A(all domains)
UniProt: D6D1V7 (all domains)
Gene: BXY_34140

Molecule: Glycosyl hydrolase family 71

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_99 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_99(2002.1.1.185)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Acetate, 1,2-ETHANEDIOL)

AcetateACT
DrugBank DB14511
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF16317Glyco_hydro_99

Glycosyl hydrolase family 99

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5M17 RCSB PDB: 5M17 PDBe: 5M17 UniProt: D6D1V7

Downloads

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