ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tg1A1 - ECOD Domain | ECOD

ECOD/Domains/e5tg1A1

e5tg1A1

UID: 001943053

PDB

Range: A:4-172
PDB: 5TG1 chain A(all domains)
UniProt: Q83883 (all domains)
Gene: ORF1

Molecule: 3C-LIKE PROTEASE

3D Structure

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Related Domains

Browse other domains in Peptidase_C37 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_C37(1.1.5.20)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(4S,7S,17S)-17-(3-chlorophenyl)-7-(hydroxymethyl)-4-(2-methylpropyl)-1-oxa-3,6,11-triazacycloheptadecane-2,5,10-trioneV56

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05416Peptidase_C37

Southampton virus-type processing peptidase

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5TG1 RCSB PDB: 5TG1 PDBe: 5TG1 UniProt: Q83883

Downloads

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