ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tg6A2 - ECOD Domain | ECOD

ECOD/Domains/e5tg6A2

e5tg6A2

UID: 001943060

PDB

Range: A:31-76,A:174-275
PDB: 5TG6 chain A(all domains)
UniProt: Q8RLA6 (all domains)
Gene: blaOXA-33

Molecule: Beta-lactamase

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Ligands

in contact, ≤ 4 Å

tert-butyl (1-hydroxy-1,3-dihydro-2,1-benzoxaborol-6-yl)carbamateJ4W

+ 2 additives (Sulfate ion, Bicarbonate ion)

Sulfate ionSO4
DrugBank DB14546
Bicarbonate ionBCT

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 5TG6 RCSB PDB: 5TG6 PDBe: 5TG6 UniProt: Q8RLA6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.