ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5trgJ1 - ECOD Domain | ECOD

ECOD/Domains/e5trgJ1

e5trgJ1

UID: 001943136

PDB

Range: J:1-222
PDB: 5TRG chain J(all domains)
UniProt: A5U4D6 (all domains)
Gene: prcB

Molecule: Proteasome subunit beta

3D Structure

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Related Domains

Browse other domains in Proteasome →

Classification

AArchitecturea+b four layers(a.13)

XX-groupNtn/PP2C(210)

HH-groupNtn(210.1)

TT-groupProteasome subunits(210.1.1)

FFamilyProteasome(210.1.1.1)

Ligands

in contact, ≤ 4 Å

N,N-diethyl-N~2~-[(2E)-3-phenylprop-2-enoyl]-L-asparaginyl-4-fluoro-N-[(naphthalen-1-yl)methyl]-L-phenylalaninamide7HJ

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00227Proteasome

Proteasome subunit

ClanCL0052NTN

External Links

ECOD PDB View: 5TRG RCSB PDB: 5TRG PDBe: 5TRG UniProt: A5U4D6

Downloads

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