ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5u1hB1 - ECOD Domain | ECOD

ECOD/Domains/e5u1hB1

e5u1hB1

UID: 001943286

PDB

Range: B:-2-119
PDB: 5U1H chain B(all domains)
UniProt: P13794 (all domains)
Gene: oprF

Molecule: Outer membrane porin F

3D Structure

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Related Domains

Browse other domains in OmpA →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupOmpA-like(301.3)

TT-groupOmpA-like(301.3.1)

FFamilyOmpA(301.3.1.1)

Ligands

in contact, ≤ 4 Å

(2R,6S)-2-amino-6-(carboxyamino)-7-{[(1R)-1-carboxyethyl]amino}-7-oxoheptanoic acid7QA
Chloride ionCL

+ 2 additives (Acetate, Sulfate ion)

AcetateACT

Pfam Families

OmpA family

External Links

ECOD PDB View: 5U1H RCSB PDB: 5U1H PDBe: 5U1H UniProt: P13794

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.