ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5u5dA1 - ECOD Domain | ECOD

ECOD/Domains/e5u5dA1

e5u5dA1

UID: 001944074

PDB

Range: A:66-190
PDB: 5U5D chain A(all domains)
UniProt: Q9JN69 (all domains)
Gene: hppE

Molecule: (S)-2-hydroxypropylphosphonic acid epoxidase

3D Structure

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Related Domains

Browse other domains in Cupin_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyCupin_2(10.12.1.39)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
[(2R)-2-hydroxypropyl]phosphonic acidTB6

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07883Cupin_2

Cupin domain

ClanCL0029Cupin

External Links

ECOD PDB View: 5U5D RCSB PDB: 5U5D PDBe: 5U5D UniProt: Q9JN69

Downloads

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