ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jjvA3 - ECOD Domain | ECOD

ECOD/Domains/e5jjvA3

e5jjvA3

UID: 001945492

PDB

Range: A:1-174
PDB: 5JJV chain A(all domains)
UniProt: O25386 (all domains)
Gene: xerH

Molecule: Tyrosine recombinase XerH

3D Structure

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Related Domains

Browse other domains in Phage_int_SAM_6 →

Classification

AArchitecturealpha arrays(a.6)

XX-grouplambda integrase-N-like(186)

HH-grouplambda integrase-N(186.1)

TT-grouplambda integrase-N(186.1.1)

FFamilyPhage_int_SAM_6(186.1.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18644Phage_int_SAM_6

Phage integrase SAM-like domain

ClanCL0469l-integrase_N

External Links

ECOD PDB View: 5JJV RCSB PDB: 5JJV PDBe: 5JJV UniProt: O25386

Downloads

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