ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5jctA2 - ECOD Domain | ECOD

ECOD/Domains/e5jctA2

e5jctA2

UID: 001945546

PDB

Range: A:140-290
PDB: 5JCT chain A(all domains)
UniProt: O00625 (all domains)
Gene: PIR

Molecule: Pirin

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pirin_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyPirin_C(10.12.1.26)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Dimethyl sulfoxide, Glycerin)

Dimethyl sulfoxideDMS
DrugBank DB01093
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05726Pirin_C

Pirin C-terminal cupin domain

ClanCL0029Cupin

External Links

ECOD PDB View: 5JCT RCSB PDB: 5JCT PDBe: 5JCT UniProt: O00625

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure