ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mkeC1 - ECOD Domain | ECOD

ECOD/Domains/e5mkeC1

e5mkeC1

UID: 001945919

PDB

Range: C:244-463
PDB: 5MKE chain C(all domains)
UniProt: Q13563 (all domains)
Gene: PKD2

Molecule: Polycystin-2

3D Structure

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Related Domains

Browse other domains in Polycystin_dom →

Classification

AArchitecturea+b two layers(a.11)

XX-groupPolycystin-mucolipin domain(1116)

HH-groupPolycystin-mucolipin domain(1116.1)

TT-groupPolycystin-mucolipin domain(1116.1.1)

FFamilyPolycystin_dom(1116.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Palmitic acidPLM
1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATEPX6

Shown in the structure viewer.

Pfam Families

PF20519Polycystin_dom

Polycystin domain

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5MKE RCSB PDB: 5MKE PDBe: 5MKE UniProt: Q13563

Downloads

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Drug annotations from DrugDomain.