ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5g08A1 - ECOD Domain | ECOD

ECOD/Domains/e5g08A1

e5g08A1

UID: 001948601

PDB

Range: A:4-95
PDB: 5G08 chain A(all domains)
UniProt: Q9VWX8 (all domains)
Gene: Frq2

Molecule: FREQUENIN 2

3D Structure

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Related Domains

Browse other domains in EF hand domain / EF-hand domain pair →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyEF hand domain / EF-hand domain pair(108.1.1.4)

Ligands

in contact, ≤ 4 Å

ChlorpromazineZ80
drugDrugBank DB00477
Calcium ionCA
metal

+ 2 additives (Glycerin, 1,2-ETHANEDIOL)

GlycerinGOL

Pfam Families

PF00036EF-hand_1

EF hand domain

ClanCL0220EF_hand

PF13833EF-hand_8

EF-hand domain pair

ClanCL0220EF_hand

External Links

ECOD PDB View: 5G08 RCSB PDB: 5G08 PDBe: 5G08 UniProt: Q9VWX8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.