ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hpoA1 - ECOD Domain | ECOD

ECOD/Domains/e5hpoA1

e5hpoA1

UID: 001948730

PDB

Range: A:935-1060
PDB: 5HPO chain A(all domains)
UniProt: Q8Y4J2 (all domains)
Gene: lmo2446

Molecule: Lmo2446 protein

3D Structure

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Related Domains

Browse other domains in CBM_6 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyCBM_6(10.32.1.12)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Carbohydrate binding module (family 6)

ClanCL0202GBD

External Links

ECOD PDB View: 5HPO RCSB PDB: 5HPO PDBe: 5HPO UniProt: Q8Y4J2

Downloads

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