ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ckmA1 - ECOD Domain | ECOD

ECOD/Domains/e5ckmA1

e5ckmA1

UID: 001952707

PDB

Range: A:163-278
PDB: 5CKM chain A(all domains)
UniProt: A2VCV7 (all domains)
Gene: Masp2

Molecule: Mannan-binding lectin serine peptidase 2

3D Structure

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Related Domains

Browse other domains in CUB →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupSpermadhesin, CUB domain(10.4)

TT-groupSpermadhesin, CUB domain(10.4.1)

FFamilyCUB(10.4.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

CUB domain

ClanCL0164CUB

External Links

ECOD PDB View: 5CKM RCSB PDB: 5CKM PDBe: 5CKM UniProt: A2VCV7

Downloads

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