ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ckqA1 - ECOD Domain | ECOD

ECOD/Domains/e5ckqA1

e5ckqA1

UID: 001952716

PDB

Range: A:2-120
PDB: 5CKQ chain A(all domains)
UniProt: Q8CHN8 (all domains)
Gene: Masp1

Molecule: Mannan-binding lectin serine protease 1

3D Structure

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Related Domains

Browse other domains in CUB →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupSpermadhesin, CUB domain(10.4)

TT-groupSpermadhesin, CUB domain(10.4.1)

FFamilyCUB(10.4.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
2-acetamido-2-deoxy-beta-D-glucopyranoseNAG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

CUB domain

ClanCL0164CUB

External Links

ECOD PDB View: 5CKQ RCSB PDB: 5CKQ PDBe: 5CKQ UniProt: Q8CHN8

Downloads

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