ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ckqA3 - ECOD Domain | ECOD

ECOD/Domains/e5ckqA3

e5ckqA3

UID: 001952718

PDB

Range: A:121-164
PDB: 5CKQ chain A(all domains)
UniProt: Q8CHN8 (all domains)
Gene: Masp1

Molecule: Mannan-binding lectin serine protease 1

3D Structure

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Related Domains

Browse other domains in cEGF, FXa_inhibition →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilycEGF, FXa_inhibition(389.1.1.97)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Complement Clr-like EGF-like

ClanCL0001EGF

PF14670FXa_inhibition

Coagulation Factor Xa inhibitory site

ClanCL0001EGF

External Links

ECOD PDB View: 5CKQ RCSB PDB: 5CKQ PDBe: 5CKQ UniProt: Q8CHN8

Downloads

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