ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hl3A1 - ECOD Domain | ECOD

ECOD/Domains/e5hl3A1

e5hl3A1

UID: 001952965

RepresentativePDB

Range: A:33-74
PDB: 5HL3 chain A(all domains)
UniProt: Q8Y4H2 (all domains)
Gene: lmo2470

Molecule: Lmo2470 protein

3D Structure

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Related Domains

Browse other domains in Internalin_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyInternalin_N(108.1.1.24)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12354Internalin_N

Bacterial adhesion/invasion protein N terminal

ClanCL0220EF_hand

External Links

ECOD PDB View: 5HL3 RCSB PDB: 5HL3 PDBe: 5HL3 UniProt: Q8Y4H2

Downloads

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