ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hlmC1 - ECOD Domain | ECOD

ECOD/Domains/e5hlmC1

e5hlmC1

UID: 001952970

PDB

Range: C:2-123
PDB: 5HLM chain C(all domains)
UniProt: P02701 (all domains)
Gene: AVD

Molecule: Avidin

3D Structure

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Related Domains

Browse other domains in Avidin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupAvidin/Streptavidin(9.2)

TT-groupAvidin/Streptavidin(9.2.1)

FFamilyAvidin(9.2.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
[(1,2,3,4,5-eta)-cyclopentadienyl]{(1,2,3,4,5-eta)-1-[1-hydroxy-5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentyl]cyclopentadienyl}ironB9F

Shown in the structure viewer. Drug annotations from .

Pfam Families

Avidin family

External Links

ECOD PDB View: 5HLM RCSB PDB: 5HLM PDBe: 5HLM UniProt: P02701

Downloads

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