ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hrhA1 - ECOD Domain | ECOD

ECOD/Domains/e5hrhA1

e5hrhA1

UID: 001952986

PDB

Range: A:1-174
PDB: 5HRH chain A(all domains)
UniProt: A0A0A1E3N6 (all domains)
Gene: O174L

Molecule: DNA polymerase beta-like protein

3D Structure

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Related Domains

Browse other domains in NTP_transf_2,DNA_pol_B_thumb →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNucleotidyltransferase-like(316)

HH-groupNucleotidyltransferase(316.1)

TT-groupNucleotidyltransferase(316.1.1)

FFamilyNTP_transf_2,DNA_pol_B_thumb(316.1.1.4)

Ligands

in contact, ≤ 4 Å

2'-Deoxyguanosine-5'-TriphosphateDGT
drugDrugBank DB02181
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01909NTP_transf_2

Nucleotidyltransferase domain

ClanCL0260NTP_transf

PF14791DNA_pol_B_thumb

DNA polymerase beta thumb

External Links

ECOD PDB View: 5HRH RCSB PDB: 5HRH PDBe: 5HRH UniProt: A0A0A1E3N6

Downloads

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