ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tgmL61 - ECOD Domain | ECOD

ECOD/Domains/e5tgmL61

e5tgmL61

UID: 001953225

PDB

Range: L6:2-109,L6:129-176
PDB: 5TGM chain L6(all domains)
UniProt: Q02326 (all domains)
Gene: RPL6A

Molecule: 60S ribosomal protein L6-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_L6e →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyRibosomal_L6e(4.1.1.15)

Ligands

in contact, ≤ 4 Å

PhenylalaninePHE
drugDrugBank DB00120within 5 Å only
Magnesium ionMG
metal
osmium (III) hexammineOHX

Pfam Families

PF01159Ribosomal_L6e

Ribosomal protein L6e

External Links

ECOD PDB View: 5TGM RCSB PDB: 5TGM PDBe: 5TGM UniProt: Q02326

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.