ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4y9vA3 - ECOD Domain | ECOD

ECOD/Domains/e4y9vA3

e4y9vA3

UID: 001954234

PDB

Range: A:125-220,A:310-623
PDB: 4Y9V chain A(all domains)
UniProt: I2GUG1 (all domains)

Molecule: Particle-associated lyase

3D Structure

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Related Domains

Browse other domains in Gp49_Pectate_lyase_like →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyGp49_Pectate_lyase_like(207.2.1.31)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, Sulfate ion)

1,2-ETHANEDIOLEDO
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF22442Gp49_Pectate_lyase_like

Gp49, pectin lyase-like

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 4Y9V RCSB PDB: 4Y9V PDBe: 4Y9V UniProt: I2GUG1

Downloads

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