ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ib5D2 - ECOD Domain | ECOD

ECOD/Domains/e5ib5D2

e5ib5D2

UID: 001954596

PDB

Range: D:1-181
PDB: 5IB5 chain D(all domains)
UniProt: P01889 (all domains)
Gene: HLA-B

Molecule: HLA class I histocompatibility antigen, B-27 alpha chain

3D Structure

Loading viewer...

Related Domains

Browse other domains in MHC_I →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_I(233.1.1.1)

Ligands

in contact, ≤ 4 Å

COPPER (II) IONCU
metal
Chloride ionCL
within 5 Å only

+ 1 additive (Glycerin)

Glycerin

Pfam Families

Class I Histocompatibility antigen, domains alpha 1 and 2

ClanCL0343MHC

External Links

ECOD PDB View: 5IB5 RCSB PDB: 5IB5 PDBe: 5IB5 UniProt: P01889

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.