ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kmsB1 - ECOD Domain | ECOD

ECOD/Domains/e5kmsB1

e5kmsB1

UID: 001954627

PDB

Range: B:104-253
PDB: 5KMS chain B(all domains)
UniProt: F5L3B8 (all domains)
Gene: CathTA2_0279

Molecule: FAD-dependent pyridine nucleotide-disulfide oxidoreductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5KMS RCSB PDB: 5KMS PDBe: 5KMS UniProt: F5L3B8

Downloads

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