ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rvgA1 - ECOD Domain | ECOD

ECOD/Domains/e4rvgA1

e4rvgA1

UID: 001955201

PDB

Range: A:6-68
PDB: 4RVG chain A(all domains)
UniProt: Q194Q4 (all domains)
Gene: mtmC

Molecule: D-mycarose 3-C-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_13 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyMethyltransf_13(375.1.1.41)

Ligands

in contact, ≤ 4 Å

Thymidine-5'- DiphosphateTYD
drugDrugBank DB03103within 5 Å only
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08421Methyltransf_13

Putative zinc binding domain

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 4RVG RCSB PDB: 4RVG PDBe: 4RVG UniProt: Q194Q4

Downloads

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