ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rvhA3 - ECOD Domain | ECOD

ECOD/Domains/e4rvhA3

e4rvhA3

UID: 001955205

PDB

Range: A:69-289
PDB: 4RVH chain A(all domains)
UniProt: Q194Q4 (all domains)
Gene: mtmC

Molecule: D-mycarose 3-C-methyltransferase

3D Structure

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Related Domains

Browse other domains in Methyltransf_23 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_23(2003.1.5.79)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
[(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl(2R,4R,6R)-4-hydroxy-6-methyl-5-oxotetrahydro-2H-pyran-2-yl dihydrogen diphosphate3YN

Shown in the structure viewer.

Pfam Families

PF13489Methyltransf_23

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4RVH RCSB PDB: 4RVH PDBe: 4RVH UniProt: Q194Q4

Downloads

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Drug annotations from DrugDomain.