ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2p14A1 - ECOD Domain | ECOD

ECOD/Domains/e2p14A1

e2p14A1

UID: 000198173

PDB

Range: A:1-186
PDB: 2P14 chain A(all domains)
UniProt: A3FEV8 (all domains)
Gene: bspD6IR2

Molecule: Heterodimeric restriction endonuclease R.BspD6I small subunit

3D Structure

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Related Domains

Browse other domains in RE_AlwI →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyRE_AlwI(2008.1.1.45)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09491RE_AlwI

AlwI restriction endonuclease

ClanCL0236PDDEXK

External Links

ECOD PDB View: 2P14 RCSB PDB: 2P14 PDBe: 2P14 UniProt: A3FEV8

Downloads

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