ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2qc5A1 - ECOD Domain | ECOD

ECOD/Domains/e2qc5A1

e2qc5A1

UID: 000200063

RepresentativePDB

Range: A:-3-294
PDB: 2QC5 chain A(all domains)
UniProt: O87275 (all domains)
Gene: vgbB

Molecule: Streptogramin B lactonase

3D Structure

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Related Domains

Browse other domains in Vgb_lyase →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyVgb_lyase(5.1.4.163)

Ligands

in contact, ≤ 4 Å

Iodide ionIOD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF24684Vgb_lyase

Virginiamycin B lyase family

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 2QC5 RCSB PDB: 2QC5 PDBe: 2QC5 UniProt: O87275

Downloads

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