ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3esmA1 - ECOD Domain | ECOD

ECOD/Domains/e3esmA1

e3esmA1

UID: 000200078

RepresentativePDB

Range: A:27-164
PDB: 3ESM chain A(all domains)
UniProt: Q5Z3N8 (all domains)
Gene: NFA_1110

Molecule: uncharacterized protein

3D Structure

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Related Domains

Browse other domains in DUF1775 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupCommon fold of diphtheria toxin/transcription factors/cytochrome f(11.1.5)

FFamilyDUF1775(11.1.5.28)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Dimethyl sulfoxide, Sulfate ion)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07987DUF1775

Domain of unknown function (DUF1775)

ClanCL0159E-set

External Links

ECOD PDB View: 3ESM RCSB PDB: 3ESM PDBe: 3ESM UniProt: Q5Z3N8

Downloads

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