ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5matA1 - ECOD Domain | ECOD

ECOD/Domains/e5matA1

e5matA1

UID: 002010530

PDB

Range: A:189-232
PDB: 5MAT chain A(all domains)
UniProt: Q8IXJ6 (all domains)
Gene: SIRT2

Molecule: NAD-dependent protein deacetylase sirtuin-2

3D Structure

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Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

(7~{R})-7-[(3,5-dimethyl-1,2-oxazol-4-yl)methylamino]-3-[(4-methoxynaphthalen-1-yl)methyl]-5,6,7,8-tetrahydro-[1]benzothiolo[2,3-d]pyrimidin-4-one7KJ
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

External Links

ECOD PDB View: 5MAT RCSB PDB: 5MAT PDBe: 5MAT UniProt: Q8IXJ6

Downloads

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Sulfate ion

Shown in the structure viewer. Drug annotations from DrugDomain.